Gluten Free Apple Pie Cupcakes

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Delicious Gluten Free Apple Pie Cupcakes with lucious Caramel Topping!
Delicious Gluten Free Apple Pie Cupcakes with Caramel Topping | perfect Fall comfort food! | Gluten Free | Dairy Free |

Cupcakes are a big thing these days, there are cupcake stores, cupcake wars, cupcake blogs and I’m sure there’s a whole lot more cupcakery going on out there that I know nothing about.

I recently had a little look at  menus for some of these specialty cupcake shops, The variety of flavors available these days are simply mind boggling, gone are the days of a plain old cupcake with vanilla frosting, that’s so 2008! Not to be outdone I figured I would try and gluten freeify a couple of them, so here’s my first attempt with my Gluten Free Apple Pie Cupcakes.

I’m thrilled to report that it was a hit with my children, I realize that may be setting the bar low as they will pretty much eat anything with salt, fat, and sugar in it, but they insisted it was very good and better than your average cupcake. Number one son, who is twelve and about five inches taller than me, scoffed it down in two mouthfuls, I’m pretty sure that’s a good sign.

As I mention in the notes section of the recipe, I always bake by weight as I’ve found it gives the most consistent results. Different gluten free flour blends can vary significantly in terms of how much they weigh and that can drastically alter the outcome of a recipe. These days I make my own All Purpose Gluten Free Flour Blend, it’s really easy and I use a digital scale to weigh my ingredients.

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cupcakes with apple pie fillingI used a piping bag with a 1M Wilton tip to pipe the frosting, if you don’t have one you can simply spoon it on, it won’t look as cute but it will taste just as good! I don’t have one of those fancy cupcake coring tools and you don’t need one either, I simply scooped out a little piece of the cupcake with a teaspoon measuring spoon, a melon baller would work well too. Then add a scoop of the cooked apple pie filling to the cupcake and top it off with some of the caramel sauce, pipe the frosting on after that and drizzle with some more caramel when you are ready to serve.

Delicious Gluten Free Apple Pie Cupcakes with Caramel Topping | perfect Fall comfort food! | Gluten Free | Dairy Free |

Gluten Free Apple Pie Cupcakes
Prep time
Cook time
Total time
Delicious Gluten Free Apple Pie Cupcakes with lucious Caramel Topping
Recipe type: Baking
Cuisine: American
Serves: 12
  • ½ cup soft brown sugar
  • ½ cup full fat coconut milk
  • 2 tablespoons water
  • 125g/ ⅔rd cup sugar
  • 125g/ 3/5th cup plus 1 tablespoon, dairy free margarine or butter
  • 2 large eggs
  • ½ teaspoon vanilla extract
  • 1 tsp cinnamon powder
  • 125g/ ¾ cup gluten free all purpose flour
  • 2 tsp baking powder
  • ¼ tsp xanthan gum (omit if your flour has gum added)
  • 2 tablespoons dairy free milk
  • 2 granny smith apples, peeled and chopped into small pieces
  • 55g or ¼ cup dairy free margarine
  • 50g or ¼ cup soft brown sugar
  • ½ tsp cinnamon
  • 200g or 1 cup dairy free margarine
  • 300g - 400g or 2-2.5 cups sifted powdered sugar
  • ½ teaspoon vanilla extract
  1. *Please read the notes section before you start!*
  3. This is optional, I suggest making this first if you intend to use it. add all ingredients to a pan on the stovetop and cook gently over a low heat until the sugar is melted. simmer for about 15 minutes until thickened.
  5. Preheat the oven to 350f
  6. Cream together the margarine and sugar.
  7. Add the eggs, vanilla and cinnamon and mix until combined.
  8. in a separate bowl mix sift together the flour, baking powder and xanthan gum.
  9. Add the flour to the bowl along with two tablespoons of milk and and mix well.
  10. Divide the mixture evenly into 12 cupcake wrappers and bake for about 20 minutes or until cooked.
  11. Cool cupcakes on a baking rack
  13. While the cupcakes are cooking you can make the apple pie filling.
  14. melt the margarine on the stovetop over a low heat, and add the chopped apple, stir to coat.
  15. Add the brown sugar and cinnamon and melt, stirring all the time. When the sugar has melted cook apples gently over a low heat until cooked but not too soft, about 10 minutes.
  17. in your mixer blend together all the frosting ingredients. If you think it's not sweet enough add some more powered sugar.
  19. when the cupcakes have cooled completely use a teaspoon measure or melon baller to remove a scoop from the top of the cupcakes (see photo)
  20. fill the scooped out hole with some apple pie filling and top of with some caramel sauce.
  21. Frost the cupcakes as you desire, I used a wilton 1M tip and piping bag, drizzle with caramel sauce prior to serving.
1. I bake by weight as I find that gives the most consistent results, especially when baking gluten free. One cup of your gluten free flour blend may not weigh the same as my blend, all the commercially available blends have different mixes and ratios of flour in them. I’ve weighed cups of different blends of flour and noted that a cup of gluten free flour can vary in weight from 125g up to as much as 170g depending on how you scoop it, and what type of mix you use. You can see how this could drastically alter the outcome of a recipe.

I recognise that most Americans are used to the cup method which is why I also include those measurements,but they may not give you accurate results. If you are a keen gluten free baker I would encourage you to invest in a scale, you can get one for only $10 - $15.

2.I prefer to use my own homemade gluten free flour blend as it's cheaper and I get really great results.

3. If you can, avoid buying flour with gums already added. The reason for this is that you have no way of knowing how much gum is in there and that can alter the outcome of the recipe. So for example, too much gum can give you a more sticky texture in a cupcake. And though the cupcake recipe will still work, it won’t be as nice as if you measured and added the gum yourself.

Delicious Gluten Free Apple Pie Cupcakes with lucious Caramel Topping


  1. says

    It is crazy how popular cupcakes have become. Who would have ever thought a store dedicated only to cupcakes would have survived. But here we are. Your cupcakes look oh-so delicious. I love that scoop of apple pie filling topped with a healthy dose of frosting.

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